Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.53■□□□□ 0.4
Cdh17Q9R100 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Gm42642-201ENSMUST00000200683 355 ntBASIC17.53■□□□□ 0.4
Cdh17Q9R100 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh17Q9R100 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.52■□□□□ 0.4
Cdh17Q9R100 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.52■□□□□ 0.4
Cdh17Q9R100 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 AV356131-201ENSMUST00000206201 750 ntBASIC17.52■□□□□ 0.4
Cdh17Q9R100 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Gm5874-201ENSMUST00000096101 508 ntBASIC17.52■□□□□ 0.4
Cdh17Q9R100 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh17Q9R100 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh17Q9R100 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh17Q9R100 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh17Q9R100 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh17Q9R100 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.51■□□□□ 0.39
Cdh17Q9R100 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh17Q9R100 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdh17Q9R100 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Idnk-204ENSMUST00000226010 1898 ntBASIC17.49■□□□□ 0.39
Cdh17Q9R100 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Cdh17Q9R100 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.49■□□□□ 0.39
Cdh17Q9R100 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms