Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Gm26571-201ENSMUST00000181399 666 ntBASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RpgrQ9R0X5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Gm7291-201ENSMUST00000199147 382 ntBASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 BC021767-201ENSMUST00000126387 1716 ntBASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RpgrQ9R0X5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RpgrQ9R0X5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RpgrQ9R0X5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RpgrQ9R0X5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RpgrQ9R0X5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RpgrQ9R0X5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gm7290-201ENSMUST00000104990 617 ntBASIC18.2■□□□□ 0.5
RpgrQ9R0X5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms