Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.08■□□□□ 0.48
Shroom3Q9QXN0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Gm13836-201ENSMUST00000121159 501 ntBASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom3Q9QXN0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm6576-201ENSMUST00000169678 883 ntBASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm10698-201ENSMUST00000182663 604 ntBASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm11927-201ENSMUST00000118472 759 ntBASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom3Q9QXN0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom3Q9QXN0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom3Q9QXN0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom3Q9QXN0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom3Q9QXN0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Gm15565-201ENSMUST00000118890 427 ntBASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shroom3Q9QXN0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom3Q9QXN0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms