Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Gm22240-201ENSMUST00000175225 82 ntBASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx5Q9JL61 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rfx5Q9JL61 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx5Q9JL61 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx5Q9JL61 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.02■□□□□ 0.63
Rfx5Q9JL61 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.02■□□□□ 0.63
Rfx5Q9JL61 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx5Q9JL61 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx5Q9JL61 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx5Q9JL61 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Mir6349-201ENSMUST00000184059 97 ntBASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx5Q9JL61 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Rfx5Q9JL61 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rfx5Q9JL61 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19■□□□□ 0.63
Rfx5Q9JL61 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rfx5Q9JL61 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19■□□□□ 0.63
Rfx5Q9JL61 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19■□□□□ 0.63
Rfx5Q9JL61 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx5Q9JL61 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Gm18025-201ENSMUST00000221733 862 ntBASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx5Q9JL61 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx5Q9JL61 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.98■□□□□ 0.63
Rfx5Q9JL61 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx5Q9JL61 Grk6-206ENSMUST00000224995 2971 ntBASIC18.98■□□□□ 0.63
Rfx5Q9JL61 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx5Q9JL61 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms