Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zcchc17Q9ESX4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zcchc17Q9ESX4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zcchc17Q9ESX4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zcchc17Q9ESX4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zcchc17Q9ESX4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zcchc17Q9ESX4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.14■□□□□ 0.98
Zcchc17Q9ESX4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zcchc17Q9ESX4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Zcchc17Q9ESX4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Gm2274-201ENSMUST00000184539 609 ntBASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zcchc17Q9ESX4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms