Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Gm37055-201ENSMUST00000191866 133 ntBASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk4Q9ERK0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.89■■□□□ 1.1
Ripk4Q9ERK0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ripk4Q9ERK0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.89■■□□□ 1.09
Ripk4Q9ERK0 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.89■■□□□ 1.09
Ripk4Q9ERK0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ripk4Q9ERK0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ripk4Q9ERK0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ripk4Q9ERK0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Ripk4Q9ERK0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ripk4Q9ERK0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk4Q9ERK0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk4Q9ERK0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk4Q9ERK0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk4Q9ERK0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ripk4Q9ERK0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk4Q9ERK0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.85■■□□□ 1.09
Ripk4Q9ERK0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Gm15565-201ENSMUST00000118890 427 ntBASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk4Q9ERK0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ripk4Q9ERK0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ripk4Q9ERK0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ripk4Q9ERK0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Ripk4Q9ERK0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Mtag2-201ENSMUST00000058665 714 ntBASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ripk4Q9ERK0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ripk4Q9ERK0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms