Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lima1Q9ERG0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lima1Q9ERG0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lima1Q9ERG0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.77■□□□□ 0.44
Lima1Q9ERG0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Lima1Q9ERG0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lima1Q9ERG0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Lima1Q9ERG0 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.77■□□□□ 0.43
Lima1Q9ERG0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Gm9988-201ENSMUST00000069786 435 ntBASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lima1Q9ERG0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lima1Q9ERG0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.74■□□□□ 0.43
Lima1Q9ERG0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lima1Q9ERG0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lima1Q9ERG0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lima1Q9ERG0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lima1Q9ERG0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms