Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tubb3Q9ERD7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tubb3Q9ERD7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.86■□□□□ 0.45
Tubb3Q9ERD7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tubb3Q9ERD7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tubb3Q9ERD7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tubb3Q9ERD7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tubb3Q9ERD7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tubb3Q9ERD7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tubb3Q9ERD7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tubb3Q9ERD7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms