Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx2-4Q9EQM3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Gm13474-201ENSMUST00000122466 815 ntBASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Gm17808-201ENSMUST00000200859 894 ntBASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-4Q9EQM3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Gm9013-201ENSMUST00000132939 882 ntBASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-4Q9EQM3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Gm4974-201ENSMUST00000209974 875 ntBASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nkx2-4Q9EQM3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Gm25925-201ENSMUST00000158314 306 ntBASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Gm5867-201ENSMUST00000063197 592 ntBASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-4Q9EQM3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-4Q9EQM3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-4Q9EQM3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms