Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssr3Q9DCF9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr3Q9DCF9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr3Q9DCF9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.1■□□□□ 0.17
Ssr3Q9DCF9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Gm7860-201ENSMUST00000121190 879 ntBASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr3Q9DCF9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ssr3Q9DCF9 Cap2-205ENSMUST00000225824 1634 ntBASIC16.08■□□□□ 0.17
Ssr3Q9DCF9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ssr3Q9DCF9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ssr3Q9DCF9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ssr3Q9DCF9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ssr3Q9DCF9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms