Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Mms19Q9D071 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Mms19Q9D071 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.24■□□□□ 0.67
Mms19Q9D071 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.24■□□□□ 0.67
Mms19Q9D071 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.24■□□□□ 0.67
Mms19Q9D071 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
Mms19Q9D071 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mms19Q9D071 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Mms19Q9D071 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mms19Q9D071 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Mms19Q9D071 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mms19Q9D071 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mms19Q9D071 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mms19Q9D071 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Gm11249-201ENSMUST00000117071 859 ntBASIC19.22■□□□□ 0.67
Mms19Q9D071 Gm13168-201ENSMUST00000121771 632 ntBASIC19.22■□□□□ 0.67
Mms19Q9D071 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Gm22240-201ENSMUST00000175225 82 ntBASIC19.22■□□□□ 0.67
Mms19Q9D071 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mms19Q9D071 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mms19Q9D071 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mms19Q9D071 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mms19Q9D071 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mms19Q9D071 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mms19Q9D071 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.21■□□□□ 0.67
Mms19Q9D071 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.21■□□□□ 0.67
Mms19Q9D071 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mms19Q9D071 Flg-201ENSMUST00000050758 1488 ntBASIC19.21■□□□□ 0.67
Mms19Q9D071 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.21■□□□□ 0.67
Mms19Q9D071 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mms19Q9D071 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mms19Q9D071 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Mms19Q9D071 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.2■□□□□ 0.66
Mms19Q9D071 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Mms19Q9D071 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mms19Q9D071 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mms19Q9D071 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.19■□□□□ 0.66
Mms19Q9D071 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Mms19Q9D071 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mms19Q9D071 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Mms19Q9D071 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Mms19Q9D071 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mms19Q9D071 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mms19Q9D071 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.17■□□□□ 0.66
Mms19Q9D071 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.17■□□□□ 0.66
Mms19Q9D071 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mms19Q9D071 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mms19Q9D071 Gm5643-201ENSMUST00000117081 966 ntBASIC19.17■□□□□ 0.66
Mms19Q9D071 Gm11927-201ENSMUST00000118472 759 ntBASIC19.17■□□□□ 0.66
Mms19Q9D071 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.17■□□□□ 0.66
Mms19Q9D071 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms