Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retreg3Q9CQV4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Dio3-201ENSMUST00000097228 1449 ntBASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retreg3Q9CQV4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Zfp783-201ENSMUST00000095946 670 ntBASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg3Q9CQV4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.08■□□□□ 0.49
Retreg3Q9CQV4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Gm11927-201ENSMUST00000118472 759 ntBASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Gm38285-201ENSMUST00000192928 922 ntBASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Retreg3Q9CQV4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Gm2559-201ENSMUST00000201323 363 ntBASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Mtag2-201ENSMUST00000058665 714 ntBASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg3Q9CQV4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg3Q9CQV4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Gm11249-201ENSMUST00000117071 859 ntBASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Mir7071-201ENSMUST00000184847 69 ntBASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Flg-201ENSMUST00000050758 1488 ntBASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg3Q9CQV4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms