Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chchd1Q9CQA6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chchd1Q9CQA6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Gm8503-201ENSMUST00000118131 455 ntBASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.64□□□□□ -0.23
Chchd1Q9CQA6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chchd1Q9CQA6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Scarna2-201ENSMUST00000157560 414 ntBASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chchd1Q9CQA6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.61□□□□□ -0.23
Chchd1Q9CQA6 Gm43530-201ENSMUST00000195920 274 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms