Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trim33Q99PP7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.83■□□□□ 0.45
Trim33Q99PP7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.83■□□□□ 0.44
Trim33Q99PP7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.83■□□□□ 0.44
Trim33Q99PP7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim33Q99PP7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.82■□□□□ 0.44
Trim33Q99PP7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.82■□□□□ 0.44
Trim33Q99PP7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.82■□□□□ 0.44
Trim33Q99PP7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.82■□□□□ 0.44
Trim33Q99PP7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim33Q99PP7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim33Q99PP7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim33Q99PP7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Gm22325-201ENSMUST00000158904 308 ntBASIC17.8■□□□□ 0.44
Trim33Q99PP7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.8■□□□□ 0.44
Trim33Q99PP7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim33Q99PP7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.8■□□□□ 0.44
Trim33Q99PP7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim33Q99PP7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.79■□□□□ 0.44
Trim33Q99PP7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim33Q99PP7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.78■□□□□ 0.44
Trim33Q99PP7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim33Q99PP7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim33Q99PP7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim33Q99PP7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms