Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim8Q99PJ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim8Q99PJ2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Gm43060-201ENSMUST00000200621 289 ntBASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim8Q99PJ2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Reep4-203ENSMUST00000226563 1444 ntBASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim8Q99PJ2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim8Q99PJ2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Gm9988-201ENSMUST00000069786 435 ntBASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Tgds-204ENSMUST00000228543 1594 ntBASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim8Q99PJ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim8Q99PJ2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim8Q99PJ2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim8Q99PJ2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim8Q99PJ2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim8Q99PJ2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim8Q99PJ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim8Q99PJ2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim8Q99PJ2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms