Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh23Q99PF4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh23Q99PF4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.44■□□□□ 0.54
Cdh23Q99PF4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Gm11950-201ENSMUST00000121615 838 ntBASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh23Q99PF4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Gm27742-201ENSMUST00000184667 60 ntBASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.42■□□□□ 0.54
Cdh23Q99PF4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh23Q99PF4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Birc2-201ENSMUST00000054878 378 ntBASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.41■□□□□ 0.54
Cdh23Q99PF4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Gm6623-201ENSMUST00000173570 544 ntBASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Mir8098-201ENSMUST00000184011 137 ntBASIC18.4■□□□□ 0.54
Cdh23Q99PF4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh23Q99PF4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.39■□□□□ 0.54
Cdh23Q99PF4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Cdh23Q99PF4 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Gm37935-201ENSMUST00000192012 982 ntBASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh23Q99PF4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms