Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Gm26524-201ENSMUST00000192339 390 ntBASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Rab3c-203ENSMUST00000224180 967 ntBASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubqln4Q99NB8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Gm44549-201ENSMUST00000208351 577 ntBASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubqln4Q99NB8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Gm10602-201ENSMUST00000098239 609 ntBASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Grk6-206ENSMUST00000224995 2971 ntBASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ubqln4Q99NB8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubqln4Q99NB8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ubqln4Q99NB8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Gm2399-201ENSMUST00000104944 225 ntBASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Fst-202ENSMUST00000223640 2612 ntBASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.33■□□□□ 0.2
Ubqln4Q99NB8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ubqln4Q99NB8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubqln4Q99NB8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubqln4Q99NB8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubqln4Q99NB8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubqln4Q99NB8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ubqln4Q99NB8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms