Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm10252-201ENSMUST00000209541 832 ntBASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlr3Q99MB1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Gm2399-201ENSMUST00000104944 225 ntBASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.32■□□□□ 0.68
Tlr3Q99MB1 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Tlr3Q99MB1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.31■□□□□ 0.68
Tlr3Q99MB1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Gm10812-201ENSMUST00000099864 546 ntBASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tlr3Q99MB1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tlr3Q99MB1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.28■□□□□ 0.68
Tlr3Q99MB1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr3Q99MB1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr3Q99MB1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tlr3Q99MB1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.27■□□□□ 0.67
Tlr3Q99MB1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr3Q99MB1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms