Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx6-1Q99MA9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx6-1Q99MA9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx6-1Q99MA9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx6-1Q99MA9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx6-1Q99MA9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx6-1Q99MA9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx6-1Q99MA9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Gm7461-201ENSMUST00000058918 827 ntBASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx6-1Q99MA9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms