Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Gm38027-201ENSMUST00000192315 235 ntBASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Gm45058-201ENSMUST00000205810 766 ntBASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarcd2Q99JR8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smarcd2Q99JR8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Gm7367-201ENSMUST00000057611 492 ntBASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smarcd2Q99JR8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarcd2Q99JR8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Gm10013-201ENSMUST00000106074 672 ntBASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Gm23634-201ENSMUST00000175071 91 ntBASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Gm18032-201ENSMUST00000222541 538 ntBASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Gm10819-201ENSMUST00000099988 561 ntBASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.18■□□□□ 0.5
Smarcd2Q99JR8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Gm2274-201ENSMUST00000184539 609 ntBASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcd2Q99JR8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms