Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk9Q99J95 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Gm8969-201ENSMUST00000199694 526 ntBASIC18.12■□□□□ 0.49
Cdk9Q99J95 Gm6139-201ENSMUST00000079261 882 ntBASIC18.12■□□□□ 0.49
Cdk9Q99J95 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cdk9Q99J95 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.11■□□□□ 0.49
Cdk9Q99J95 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk9Q99J95 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.1■□□□□ 0.49
Cdk9Q99J95 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.1■□□□□ 0.49
Cdk9Q99J95 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk9Q99J95 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cdk9Q99J95 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.08■□□□□ 0.49
Cdk9Q99J95 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk9Q99J95 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk9Q99J95 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk9Q99J95 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk9Q99J95 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.08■□□□□ 0.48
Cdk9Q99J95 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk9Q99J95 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms