Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp1aQ921W0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.89■□□□□ 0.13
Chmp1aQ921W0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp1aQ921W0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.88■□□□□ 0.13
Chmp1aQ921W0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp1aQ921W0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Smad6-203ENSMUST00000179458 273 ntBASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp1aQ921W0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp1aQ921W0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp1aQ921W0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms