Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha2Q91Y17 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha2Q91Y17 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha2Q91Y17 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Gm22240-201ENSMUST00000175225 82 ntBASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Grk6-206ENSMUST00000224995 2971 ntBASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha2Q91Y17 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Gm18025-201ENSMUST00000221733 862 ntBASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha2Q91Y17 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha2Q91Y17 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha2Q91Y17 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms