Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Mtag2-201ENSMUST00000058665 714 ntBASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdha9Q91Y11 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha9Q91Y11 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha9Q91Y11 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Pcdha9Q91Y11 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdha9Q91Y11 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Pcdha9Q91Y11 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha9Q91Y11 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Trmt13-210ENSMUST00000198454 880 ntBASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.13■□□□□ 0.65
Pcdha9Q91Y11 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha9Q91Y11 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Gm13158-201ENSMUST00000122007 736 ntBASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Gm10138-203ENSMUST00000206952 366 ntBASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha9Q91Y11 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha9Q91Y11 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdha9Q91Y11 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms