Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb1Q91XX8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb1Q91XX8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Rarb-207ENSMUST00000225921 2756 ntBASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb1Q91XX8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Mir7071-201ENSMUST00000184847 69 ntBASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb1Q91XX8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Gm38285-201ENSMUST00000192928 922 ntBASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb1Q91XX8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb1Q91XX8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgb1Q91XX8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Gm715-201ENSMUST00000117865 831 ntBASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb1Q91XX8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb1Q91XX8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms