Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb4Q91XX6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb4Q91XX6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdhgb4Q91XX6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb4Q91XX6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb4Q91XX6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb4Q91XX6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.02■□□□□ 0.63
Pcdhgb4Q91XX6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb4Q91XX6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Gm6211-202ENSMUST00000167849 925 ntBASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Gm27405-201ENSMUST00000184201 112 ntBASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb4Q91XX6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb4Q91XX6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb4Q91XX6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Gm13148-201ENSMUST00000118892 745 ntBASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb4Q91XX6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb4Q91XX6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb4Q91XX6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms