Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vsx1Q91V10 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Gm18959-201ENSMUST00000208954 655 ntBASIC17.8■□□□□ 0.44
Vsx1Q91V10 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vsx1Q91V10 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vsx1Q91V10 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vsx1Q91V10 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.78■□□□□ 0.44
Vsx1Q91V10 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vsx1Q91V10 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.77■□□□□ 0.44
Vsx1Q91V10 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.77■□□□□ 0.43
Vsx1Q91V10 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vsx1Q91V10 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vsx1Q91V10 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vsx1Q91V10 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.76■□□□□ 0.43
Vsx1Q91V10 Gm18101-201ENSMUST00000215769 548 ntBASIC17.76■□□□□ 0.43
Vsx1Q91V10 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vsx1Q91V10 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vsx1Q91V10 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Gm12382-201ENSMUST00000122005 922 ntBASIC17.75■□□□□ 0.43
Vsx1Q91V10 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vsx1Q91V10 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.75■□□□□ 0.43
Vsx1Q91V10 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms