Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb11Q91UZ8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Gm20049-201ENSMUST00000219950 730 ntBASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb11Q91UZ8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhb11Q91UZ8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Gm2559-201ENSMUST00000201323 363 ntBASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Dio3-201ENSMUST00000097228 1449 ntBASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb11Q91UZ8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb11Q91UZ8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Gm12527-201ENSMUST00000117967 564 ntBASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Gm12896-201ENSMUST00000118430 226 ntBASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Gm38285-201ENSMUST00000192928 922 ntBASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Zfp783-201ENSMUST00000095946 670 ntBASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Flg-201ENSMUST00000050758 1488 ntBASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb11Q91UZ8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb11Q91UZ8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Gm11927-201ENSMUST00000118472 759 ntBASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb11Q91UZ8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb11Q91UZ8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms