Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg1dQ8VE91 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg1dQ8VE91 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg1dQ8VE91 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retreg1dQ8VE91 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Gm2399-201ENSMUST00000104944 225 ntBASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retreg1dQ8VE91 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retreg1dQ8VE91 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Gm11249-201ENSMUST00000117071 859 ntBASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Retreg1dQ8VE91 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retreg1dQ8VE91 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retreg1dQ8VE91 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retreg1dQ8VE91 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Retreg1dQ8VE91 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retreg1dQ8VE91 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retreg1dQ8VE91 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Gm10252-201ENSMUST00000209541 832 ntBASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg1dQ8VE91 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Gm5643-201ENSMUST00000117081 966 ntBASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg1dQ8VE91 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms