Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Swsap1Q8VCI7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Swsap1Q8VCI7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Swsap1Q8VCI7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Swsap1Q8VCI7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Swsap1Q8VCI7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Swsap1Q8VCI7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Gm20049-201ENSMUST00000219950 730 ntBASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.24■□□□□ 0.19
Swsap1Q8VCI7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Swsap1Q8VCI7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Swsap1Q8VCI7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Swsap1Q8VCI7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Swsap1Q8VCI7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Swsap1Q8VCI7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Swsap1Q8VCI7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Swsap1Q8VCI7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Swsap1Q8VCI7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Swsap1Q8VCI7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Swsap1Q8VCI7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Swsap1Q8VCI7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms