Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm20049-201ENSMUST00000219950 730 ntBASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpap2Q8VC34 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rpap2Q8VC34 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rpap2Q8VC34 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Gm29257-201ENSMUST00000186115 639 ntBASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rpap2Q8VC34 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpap2Q8VC34 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpap2Q8VC34 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpap2Q8VC34 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rpap2Q8VC34 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Gm11249-201ENSMUST00000117071 859 ntBASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Mtag2-201ENSMUST00000058665 714 ntBASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpap2Q8VC34 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpap2Q8VC34 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms