Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Vps39Q8R5L3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 AV356131-201ENSMUST00000206201 750 ntBASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps39Q8R5L3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps39Q8R5L3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps39Q8R5L3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.02■□□□□ 0.47
Vps39Q8R5L3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps39Q8R5L3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Vps39Q8R5L3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Vps39Q8R5L3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18■□□□□ 0.47
Vps39Q8R5L3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18■□□□□ 0.47
Vps39Q8R5L3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Vps39Q8R5L3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Vps39Q8R5L3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18■□□□□ 0.47
Vps39Q8R5L3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18■□□□□ 0.47
Vps39Q8R5L3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Vps39Q8R5L3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Vps39Q8R5L3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Vps39Q8R5L3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms