Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Gm7213-201ENSMUST00000215977 950 ntBASIC26.81■■□□□ 1.88
Abca8bQ8K440 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Abca8bQ8K440 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Abca8bQ8K440 Gm10418-201ENSMUST00000100943 576 ntBASIC26.8■■□□□ 1.88
Abca8bQ8K440 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC26.8■■□□□ 1.88
Abca8bQ8K440 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Abca8bQ8K440 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Abca8bQ8K440 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Abca8bQ8K440 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Abca8bQ8K440 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Abca8bQ8K440 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Gm20634-201ENSMUST00000090779 2956 ntBASIC26.79■■□□□ 1.88
Abca8bQ8K440 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Abca8bQ8K440 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Abca8bQ8K440 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Abca8bQ8K440 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Abca8bQ8K440 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC26.78■■□□□ 1.88
Abca8bQ8K440 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Abca8bQ8K440 Gm11860-201ENSMUST00000122346 1010 ntBASIC26.76■■□□□ 1.87
Abca8bQ8K440 Gm25925-201ENSMUST00000158314 306 ntBASIC26.76■■□□□ 1.87
Abca8bQ8K440 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Otx2os1-206ENSMUST00000228153 787 ntBASIC26.76■■□□□ 1.87
Abca8bQ8K440 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Abca8bQ8K440 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Gm34391-201ENSMUST00000203706 907 ntBASIC26.75■■□□□ 1.87
Abca8bQ8K440 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Gm18115-201ENSMUST00000221209 621 ntBASIC26.75■■□□□ 1.87
Abca8bQ8K440 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Abca8bQ8K440 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Abca8bQ8K440 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Abca8bQ8K440 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
Abca8bQ8K440 Gm24589-201ENSMUST00000116692 94 ntBASIC26.74■■□□□ 1.87
Abca8bQ8K440 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
Abca8bQ8K440 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Abca8bQ8K440 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Abca8bQ8K440 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Abca8bQ8K440 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC26.73■■□□□ 1.87
Abca8bQ8K440 Mir3081-201ENSMUST00000175305 84 ntBASIC26.73■■□□□ 1.87
Abca8bQ8K440 Gm37025-201ENSMUST00000195159 829 ntBASIC26.73■■□□□ 1.87
Abca8bQ8K440 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC26.73■■□□□ 1.87
Abca8bQ8K440 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Abca8bQ8K440 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Abca8bQ8K440 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Abca8bQ8K440 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Abca8bQ8K440 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC26.72■■□□□ 1.87
Abca8bQ8K440 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC26.72■■□□□ 1.87
Abca8bQ8K440 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Abca8bQ8K440 Gm45906-201ENSMUST00000208911 1430 ntBASIC26.72■■□□□ 1.87
Abca8bQ8K440 Gm11355-201ENSMUST00000121120 306 ntBASIC26.72■■□□□ 1.87
Abca8bQ8K440 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC26.72■■□□□ 1.87
Abca8bQ8K440 AC164629.2-201ENSMUST00000217916 270 ntBASIC26.72■■□□□ 1.87
Abca8bQ8K440 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Abca8bQ8K440 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC26.71■■□□□ 1.87
Abca8bQ8K440 Gm3272-201ENSMUST00000181181 1229 ntBASIC26.71■■□□□ 1.87
Abca8bQ8K440 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC26.71■■□□□ 1.87
Abca8bQ8K440 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Abca8bQ8K440 Gm10566-201ENSMUST00000086739 996 ntBASIC26.71■■□□□ 1.87
Abca8bQ8K440 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Abca8bQ8K440 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC26.71■■□□□ 1.87
Abca8bQ8K440 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Abca8bQ8K440 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms