Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cystm1Q8K353 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cystm1Q8K353 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Gm43017-201ENSMUST00000198296 752 ntBASIC11.28□□□□□ -0.6
Cystm1Q8K353 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cystm1Q8K353 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cystm1Q8K353 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Cystm1Q8K353 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cystm1Q8K353 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cystm1Q8K353 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.27□□□□□ -0.6
Cystm1Q8K353 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cystm1Q8K353 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Cystm1Q8K353 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cystm1Q8K353 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cystm1Q8K353 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cystm1Q8K353 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cystm1Q8K353 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms