Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm6Q8CIR4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm6Q8CIR4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm6Q8CIR4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trpm6Q8CIR4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm6Q8CIR4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm6Q8CIR4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trpm6Q8CIR4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.08■□□□□ 0.48
Trpm6Q8CIR4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm6Q8CIR4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trpm6Q8CIR4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Gm18959-201ENSMUST00000208954 655 ntBASIC18.05■□□□□ 0.48
Trpm6Q8CIR4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms