Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.56■□□□□ 0.24
Pdlim5Q8CI51 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim5Q8CI51 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Gm10849-201ENSMUST00000100397 618 ntBASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim5Q8CI51 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim5Q8CI51 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim5Q8CI51 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim5Q8CI51 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms