Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox30Q8CGW4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox30Q8CGW4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.74■□□□□ 0.75
Sox30Q8CGW4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox30Q8CGW4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox30Q8CGW4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox30Q8CGW4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox30Q8CGW4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Mir8112-201ENSMUST00000184382 131 ntBASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox30Q8CGW4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox30Q8CGW4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms