Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hist3h2bbQ8CGP0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist3h2bbQ8CGP0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist3h2bbQ8CGP0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist3h2bbQ8CGP0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist3h2bbQ8CGP0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hist3h2bbQ8CGP0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms