Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Gm21559-201ENSMUST00000220638 855 ntBASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Gm8587-201ENSMUST00000076538 843 ntBASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Gm13474-201ENSMUST00000122466 815 ntBASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.84■□□□□ 0.61
Rp1l1Q8CGM2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rp1l1Q8CGM2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rp1l1Q8CGM2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rp1l1Q8CGM2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.83■□□□□ 0.61
Rp1l1Q8CGM2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rp1l1Q8CGM2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.83■□□□□ 0.61
Rp1l1Q8CGM2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rp1l1Q8CGM2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rp1l1Q8CGM2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rp1l1Q8CGM2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rp1l1Q8CGM2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rp1l1Q8CGM2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rp1l1Q8CGM2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rp1l1Q8CGM2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Gm11950-201ENSMUST00000121615 838 ntBASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Gm27389-201ENSMUST00000183622 195 ntBASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rp1l1Q8CGM2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.79■□□□□ 0.6
Rp1l1Q8CGM2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Gm34391-201ENSMUST00000203706 907 ntBASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rp1l1Q8CGM2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Gm18958-201ENSMUST00000174258 762 ntBASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Mzt1-203ENSMUST00000227948 952 ntBASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rp1l1Q8CGM2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rp1l1Q8CGM2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms