Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Smc5Q8CG46 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.29■■□□□ 1.16
Smc5Q8CG46 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc5Q8CG46 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc5Q8CG46 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Smc5Q8CG46 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Smc5Q8CG46 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.26■■□□□ 1.15
Smc5Q8CG46 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC22.26■■□□□ 1.15
Smc5Q8CG46 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc5Q8CG46 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Gm10493-201ENSMUST00000097270 612 ntBASIC22.25■■□□□ 1.15
Smc5Q8CG46 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Gm43548-201ENSMUST00000197139 2353 ntBASIC22.25■■□□□ 1.15
Smc5Q8CG46 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc5Q8CG46 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc5Q8CG46 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc5Q8CG46 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms