Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.74■■□□□ 1.07
Brf1Q8CFK2 Gm12527-201ENSMUST00000117967 564 ntBASIC21.74■■□□□ 1.07
Brf1Q8CFK2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Brf1Q8CFK2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brf1Q8CFK2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brf1Q8CFK2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.74■■□□□ 1.07
Brf1Q8CFK2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Brf1Q8CFK2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Gm27275-201ENSMUST00000184318 272 ntBASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Brf1Q8CFK2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Brf1Q8CFK2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Mtag2-201ENSMUST00000058665 714 ntBASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brf1Q8CFK2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Brf1Q8CFK2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Brf1Q8CFK2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Brf1Q8CFK2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Brf1Q8CFK2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brf1Q8CFK2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brf1Q8CFK2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Brf1Q8CFK2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Brf1Q8CFK2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Gm11249-201ENSMUST00000117071 859 ntBASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.69■■□□□ 1.06
Brf1Q8CFK2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brf1Q8CFK2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Brf1Q8CFK2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brf1Q8CFK2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Brf1Q8CFK2 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.67■■□□□ 1.06
Brf1Q8CFK2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms