Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Nespas-201ENSMUST00000143738 1083 ntBASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcpip1Q8CDG3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcpip1Q8CDG3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcpip1Q8CDG3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcpip1Q8CDG3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Gm22325-201ENSMUST00000158904 308 ntBASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcpip1Q8CDG3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcpip1Q8CDG3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vcpip1Q8CDG3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vcpip1Q8CDG3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms