Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pabpn1Q8CCS6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
Pabpn1Q8CCS6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Pabpn1Q8CCS6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pabpn1Q8CCS6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Pabpn1Q8CCS6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC28.12■■■□□ 2.09
Pabpn1Q8CCS6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pabpn1Q8CCS6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pabpn1Q8CCS6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC28.12■■■□□ 2.09
Pabpn1Q8CCS6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Rps4l-201ENSMUST00000071745 943 ntBASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pabpn1Q8CCS6 Gm11779-201ENSMUST00000118541 368 ntBASIC28.1■■■□□ 2.09
Pabpn1Q8CCS6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pabpn1Q8CCS6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC28.1■■■□□ 2.09
Pabpn1Q8CCS6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC28.1■■■□□ 2.09
Pabpn1Q8CCS6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Pabpn1Q8CCS6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 Il3ra-202ENSMUST00000223589 738 ntBASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Pabpn1Q8CCS6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Gm2756-201ENSMUST00000195851 400 ntBASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 CT943659.1-201ENSMUST00000215459 326 ntBASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pabpn1Q8CCS6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Pabpn1Q8CCS6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC28.08■■■□□ 2.08
Pabpn1Q8CCS6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC28.07■■■□□ 2.08
Pabpn1Q8CCS6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Gm5364-201ENSMUST00000216789 889 ntBASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Gm45640-201ENSMUST00000210665 1896 ntBASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpn1Q8CCS6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC28.05■■■□□ 2.08
Pabpn1Q8CCS6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Pabpn1Q8CCS6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Pabpn1Q8CCS6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pabpn1Q8CCS6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pabpn1Q8CCS6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pabpn1Q8CCS6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Pabpn1Q8CCS6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Pabpn1Q8CCS6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pabpn1Q8CCS6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pabpn1Q8CCS6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC28.02■■■□□ 2.08
Pabpn1Q8CCS6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms