Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Gm15375-201ENSMUST00000119510 849 ntBASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Gm10138-203ENSMUST00000206952 366 ntBASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa4Q8CA71 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shisa4Q8CA71 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Shisa4Q8CA71 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shisa4Q8CA71 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shisa4Q8CA71 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
Shisa4Q8CA71 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa4Q8CA71 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa4Q8CA71 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Shisa4Q8CA71 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa4Q8CA71 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21■□□□□ 0.95
Shisa4Q8CA71 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21■□□□□ 0.95
Shisa4Q8CA71 H2-K2-201ENSMUST00000174250 1049 ntBASIC21■□□□□ 0.95
Shisa4Q8CA71 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa4Q8CA71 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Shisa4Q8CA71 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21■□□□□ 0.95
Shisa4Q8CA71 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Shisa4Q8CA71 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shisa4Q8CA71 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa4Q8CA71 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Gm18666-201ENSMUST00000190039 958 ntBASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Shisa4Q8CA71 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.98■□□□□ 0.95
Shisa4Q8CA71 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa4Q8CA71 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.98■□□□□ 0.95
Shisa4Q8CA71 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Shisa4Q8CA71 Gm42545-201ENSMUST00000202755 922 ntBASIC20.98■□□□□ 0.95
Shisa4Q8CA71 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa4Q8CA71 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Gm18025-201ENSMUST00000221733 862 ntBASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa4Q8CA71 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa4Q8CA71 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Idnk-204ENSMUST00000226010 1898 ntBASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Gm37292-201ENSMUST00000192062 758 ntBASIC20.95■□□□□ 0.94
Shisa4Q8CA71 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa4Q8CA71 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms