Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm37292-201ENSMUST00000192062 758 ntBASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Gm42545-201ENSMUST00000202755 922 ntBASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Alx1Q8C8B0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Gm11643-201ENSMUST00000119578 864 ntBASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Alx1Q8C8B0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Alx1Q8C8B0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Gm43183-201ENSMUST00000200632 547 ntBASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Alx1Q8C8B0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Alx1Q8C8B0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Alx1Q8C8B0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Alx1Q8C8B0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Alx1Q8C8B0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Alx1Q8C8B0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.01■□□□□ 0.95
Alx1Q8C8B0 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Alx1Q8C8B0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms