Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx6Q8C7R7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx6Q8C7R7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx6Q8C7R7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.28■□□□□ 0.52
Rfx6Q8C7R7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx6Q8C7R7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx6Q8C7R7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx6Q8C7R7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rfx6Q8C7R7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms