Protein–RNA interactions for Protein: Q8C7B8

Zswim4, Zinc finger SWIM domain-containing protein 4, mousemouse

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim4Q8C7B8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zswim4Q8C7B8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zswim4Q8C7B8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zswim4Q8C7B8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Zswim4Q8C7B8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zswim4Q8C7B8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zswim4Q8C7B8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zswim4Q8C7B8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zswim4Q8C7B8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Zswim4Q8C7B8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zswim4Q8C7B8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zswim4Q8C7B8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms