Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 AA414768-201ENSMUST00000121924 1257 ntBASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Gm12382-201ENSMUST00000122005 922 ntBASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.19■■□□□ 1.14
Ptcd1Q8C2E4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Gm6345-202ENSMUST00000180900 204 ntBASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ptcd1Q8C2E4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Gm33142-201ENSMUST00000193913 867 ntBASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd1Q8C2E4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd1Q8C2E4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Ptcd1Q8C2E4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.14■■□□□ 1.14
Ptcd1Q8C2E4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Ptcd1Q8C2E4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptcd1Q8C2E4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.14■■□□□ 1.14
Ptcd1Q8C2E4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd1Q8C2E4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd1Q8C2E4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms