Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Cps1Q8C196 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC24.44■■□□□ 1.5
Cps1Q8C196 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cps1Q8C196 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Cps1Q8C196 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cps1Q8C196 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cps1Q8C196 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Cps1Q8C196 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC24.43■■□□□ 1.5
Cps1Q8C196 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Cps1Q8C196 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cps1Q8C196 Gm13474-201ENSMUST00000122466 815 ntBASIC24.42■■□□□ 1.5
Cps1Q8C196 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC24.42■■□□□ 1.5
Cps1Q8C196 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Cps1Q8C196 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cps1Q8C196 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cps1Q8C196 Gm9013-201ENSMUST00000132939 882 ntBASIC24.41■■□□□ 1.5
Cps1Q8C196 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Cps1Q8C196 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cps1Q8C196 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cps1Q8C196 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Cps1Q8C196 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cps1Q8C196 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cps1Q8C196 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Cps1Q8C196 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cps1Q8C196 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cps1Q8C196 Tgds-204ENSMUST00000228543 1594 ntBASIC24.4■■□□□ 1.5
Cps1Q8C196 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cps1Q8C196 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC24.4■■□□□ 1.5
Cps1Q8C196 Gm25016-201ENSMUST00000158399 131 ntBASIC24.4■■□□□ 1.5
Cps1Q8C196 Gm21559-201ENSMUST00000220638 855 ntBASIC24.4■■□□□ 1.5
Cps1Q8C196 Gm8587-201ENSMUST00000076538 843 ntBASIC24.4■■□□□ 1.5
Cps1Q8C196 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cps1Q8C196 Gm8258-201ENSMUST00000055593 1449 ntBASIC24.39■■□□□ 1.5
Cps1Q8C196 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cps1Q8C196 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cps1Q8C196 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC24.39■■□□□ 1.5
Cps1Q8C196 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC24.39■■□□□ 1.49
Cps1Q8C196 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
Cps1Q8C196 Gm29791-202ENSMUST00000207888 369 ntBASIC24.39■■□□□ 1.49
Cps1Q8C196 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cps1Q8C196 Il3ra-202ENSMUST00000223589 738 ntBASIC24.39■■□□□ 1.49
Cps1Q8C196 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cps1Q8C196 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cps1Q8C196 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cps1Q8C196 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cps1Q8C196 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Cps1Q8C196 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC24.38■■□□□ 1.49
Cps1Q8C196 Gm28033-201ENSMUST00000184224 96 ntBASIC24.38■■□□□ 1.49
Cps1Q8C196 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cps1Q8C196 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Cps1Q8C196 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Cps1Q8C196 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cps1Q8C196 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC24.37■■□□□ 1.49
Cps1Q8C196 Gm29518-201ENSMUST00000190858 372 ntBASIC24.37■■□□□ 1.49
Cps1Q8C196 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cps1Q8C196 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Cps1Q8C196 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC24.36■■□□□ 1.49
Cps1Q8C196 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cps1Q8C196 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Cps1Q8C196 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cps1Q8C196 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC24.35■■□□□ 1.49
Cps1Q8C196 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Cps1Q8C196 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cps1Q8C196 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cps1Q8C196 Gm9885-202ENSMUST00000186234 2209 ntBASIC24.34■■□□□ 1.49
Cps1Q8C196 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cps1Q8C196 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 228.4 ms