Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Gm29257-201ENSMUST00000186115 639 ntBASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Gm42778-201ENSMUST00000199644 553 ntBASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps9d1Q8C190 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps9d1Q8C190 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps9d1Q8C190 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps9d1Q8C190 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Vps9d1Q8C190 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.83■□□□□ 0.28
Vps9d1Q8C190 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps9d1Q8C190 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.82■□□□□ 0.28
Vps9d1Q8C190 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Gm10849-201ENSMUST00000100397 618 ntBASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Gm27405-201ENSMUST00000184201 112 ntBASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps9d1Q8C190 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps9d1Q8C190 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms